PH01001142G0200's details annotation
1.Annotation
ICBR annotation: cysteine synthase, chloroplast precursor, putative, expressed
Blast result AT3G03630 : 1.30E-90
Blast annotation: cysteine synthase 26
2.Location
Scaffold: PH01001142
Strand: -
| Region | Start | End |
| gene | 114907 | 118903 |
| mRNA | 114907 | 118903 |
| exon | 114907 | 115089 |
| exon | 116470 | 116550 |
| exon | 116675 | 116734 |
| exon | 116832 | 116881 |
| exon | 116995 | 117046 |
| exon | 117660 | 117778 |
| exon | 117924 | 118206 |
| exon | 118274 | 118903 |
| CDS | 115039 | 115089 |
| CDS | 116470 | 116550 |
| CDS | 116675 | 116734 |
| CDS | 116832 | 116881 |
| CDS | 116995 | 117046 |
| CDS | 117660 | 117778 |
| CDS | 117924 | 118206 |
| CDS | 118274 | 118504 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00291.24 | PALP | 6 | 284 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.