PH01001146G0490's details annotation
1.Annotation
ICBR annotation: NADP-dependent oxidoreductase, putative, expressed
Blast result AT5G17000 : 4.90E-46
Blast annotation: Zinc-binding dehydrogenase family protein
2.Location
Scaffold: PH01001146
Strand: -
| Region | Start | End |
| gene | 359204 | 362486 |
| mRNA | 359204 | 362486 |
| exon | 359204 | 359723 |
| exon | 360115 | 360375 |
| exon | 360718 | 360804 |
| exon | 360877 | 361043 |
| exon | 361380 | 361566 |
| exon | 361702 | 362486 |
| CDS | 359397 | 359723 |
| CDS | 360115 | 360375 |
| CDS | 360718 | 360804 |
| CDS | 360877 | 361043 |
| CDS | 361380 | 361566 |
| CDS | 361702 | 361920 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF16884.4 | ADH_N_2 | 6 | 112 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0008270 | zinc ion binding |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.