PH01001168G0440's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT2G23093 : 1.50E-65
Blast annotation: Major facilitator superfamily protein
2.Location
Scaffold: PH01001168
Strand: +
| Region | Start | End |
| gene | 293159 | 300579 |
| mRNA | 293159 | 300579 |
| exon | 293159 | 294200 |
| exon | 294288 | 294432 |
| exon | 296480 | 296717 |
| exon | 297574 | 297821 |
| exon | 298171 | 298339 |
| exon | 298426 | 298681 |
| exon | 298897 | 298937 |
| exon | 299495 | 299677 |
| exon | 299758 | 299843 |
| exon | 299925 | 300009 |
| exon | 300104 | 300579 |
| CDS | 293978 | 294200 |
| CDS | 294288 | 294432 |
| CDS | 296480 | 296717 |
| CDS | 297574 | 297821 |
| CDS | 298171 | 298339 |
| CDS | 298426 | 298681 |
| CDS | 298897 | 298937 |
| CDS | 299495 | 299677 |
| CDS | 299758 | 299843 |
| CDS | 299925 | 300009 |
| CDS | 300104 | 300238 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF05631.13 | MFS_5 | 285 | 418 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.