PH01001182G0500's details annotation
1.Annotation
ICBR annotation: aldehyde dehydrogenase, putative, expressed
Blast result AT3G24503 : 8.00E-57
Blast annotation: aldehyde dehydrogenase 2C4
2.Location
Scaffold: PH01001182
Strand: -
| Region | Start | End |
| gene | 361094 | 362451 |
| mRNA | 361094 | 362451 |
| exon | 361094 | 361421 |
| exon | 361562 | 361623 |
| exon | 361706 | 361843 |
| exon | 362170 | 362343 |
| exon | 362424 | 362451 |
| CDS | 361103 | 361421 |
| CDS | 361562 | 361623 |
| CDS | 361706 | 361843 |
| CDS | 362170 | 362343 |
| CDS | 362424 | 362438 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00171.21 | Aldedh | 2 | 62 |
| PF00171.21 | Aldedh | 64 | 179 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0008152 | metabolic process |
| GO:0016491 | oxidoreductase activity |
| GO:0016620 | oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor |
| GO:0055114 | oxidation-reduction process |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.