PH01001184G0410's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT3G55060 : 1.20E-96
Blast annotation: -
2.Location
Scaffold: PH01001184
Strand: -
| Region | Start | End |
| gene | 289062 | 294876 |
| mRNA | 289062 | 294876 |
| exon | 289062 | 289396 |
| exon | 289701 | 289811 |
| exon | 290657 | 290863 |
| exon | 291153 | 292426 |
| exon | 292514 | 293121 |
| exon | 293667 | 294876 |
| CDS | 289079 | 289396 |
| CDS | 289701 | 289811 |
| CDS | 290657 | 290863 |
| CDS | 291153 | 292426 |
| CDS | 292514 | 293121 |
| CDS | 293667 | 294013 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.