PH01001223G0200's details annotation
1.Annotation
ICBR annotation: lipase family protein, putative, expressed
Blast result AT1G73920 : 0.00E+00
Blast annotation: alpha/beta-Hydrolases superfamily protein
2.Location
Scaffold: PH01001223
Strand: +
| Region | Start | End |
| gene | 181422 | 188675 |
| mRNA | 181422 | 188675 |
| exon | 181422 | 181596 |
| exon | 182044 | 182217 |
| exon | 183025 | 183430 |
| exon | 183600 | 183865 |
| exon | 184800 | 184868 |
| exon | 186004 | 186056 |
| exon | 186134 | 186209 |
| exon | 186330 | 188675 |
| CDS | 181493 | 181596 |
| CDS | 182044 | 182217 |
| CDS | 183025 | 183430 |
| CDS | 183600 | 183865 |
| CDS | 184800 | 184868 |
| CDS | 186004 | 186056 |
| CDS | 186134 | 186209 |
| CDS | 186330 | 187404 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF04083.15 | Abhydro_lipase | 311 | 340 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0006629 | lipid metabolic process |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.