PH01001227G0540's details annotation
1.Annotation
ICBR annotation: H-BTB7 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with H family conserved sequence, expressed
Blast result AT3G05675 : 8.00E-102
Blast annotation: BTB/POZ domain-containing protein
2.Location
Scaffold: PH01001227
Strand: +
| Region | Start | End |
| gene | 335542 | 338644 |
| mRNA | 335542 | 338644 |
| exon | 335542 | 336859 |
| exon | 337129 | 337202 |
| exon | 338080 | 338644 |
| CDS | 335579 | 336859 |
| CDS | 337129 | 337202 |
| CDS | 338080 | 338458 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| Transcription_Regulator(from iTAK) | TRAF |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005515 | protein binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.