PH01001253G0180's details annotation
1.Annotation
ICBR annotation: AP-3 complex subunit delta, putative, expressed
Blast result AT4G29130 : 1.50E-47
Blast annotation: hexokinase 1
2.Location
Scaffold: PH01001253
Strand: +
| Region | Start | End |
| gene | 130327 | 136280 |
| mRNA | 130327 | 136280 |
| exon | 130327 | 132535 |
| exon | 132793 | 133010 |
| exon | 133061 | 133379 |
| exon | 133436 | 134476 |
| exon | 134734 | 134948 |
| exon | 135077 | 136280 |
| CDS | 131425 | 132535 |
| CDS | 132793 | 133010 |
| CDS | 133061 | 133379 |
| CDS | 133436 | 134476 |
| CDS | 134734 | 134948 |
| CDS | 135077 | 135289 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF03727.15 | Hexokinase_2 | 549 | 645 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005524 | ATP binding |
| GO:0005975 | carbohydrate metabolic process |
| GO:0016740 | transferase activity |
| GO:0016773 | phosphotransferase activity, alcohol group as acceptor |
| GO:0044267 | cellular protein metabolic process |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.