PH01001260G0150's details annotation
1.Annotation
ICBR annotation: ad-003, putative, expressed
Blast result AT5G44450 : 1.00E-71
Blast annotation: methyltransferases
2.Location
Scaffold: PH01001260
Strand: -
| Region | Start | End |
| gene | 125157 | 131258 |
| mRNA | 125157 | 131258 |
| exon | 125157 | 125416 |
| exon | 125959 | 126056 |
| exon | 126167 | 126221 |
| exon | 127385 | 127465 |
| exon | 128329 | 128430 |
| exon | 128528 | 128647 |
| exon | 130146 | 130279 |
| exon | 130323 | 130461 |
| exon | 130581 | 131258 |
| CDS | 125351 | 125416 |
| CDS | 125959 | 126056 |
| CDS | 126167 | 126221 |
| CDS | 127385 | 127465 |
| CDS | 128329 | 128430 |
| CDS | 128528 | 128647 |
| CDS | 130146 | 130279 |
| CDS | 130323 | 130461 |
| CDS | 130581 | 130745 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF05891.11 | Methyltransf_PK | 43 | 101 |
| PF05891.11 | Methyltransf_PK | 123 | 220 |
| PF05891.11 | Methyltransf_PK | 242 | 300 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0008168 | methyltransferase activity |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.