PH01001262G0550's details annotation
1.Annotation
ICBR annotation: SAM dependent carboxyl methyltransferase, putative, expressed
Blast result AT5G04370 : 7.00E-59
Blast annotation: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
2.Location
Scaffold: PH01001262
Strand: +
| Region | Start | End |
| gene | 387453 | 390500 |
| mRNA | 387453 | 390500 |
| exon | 387453 | 388276 |
| exon | 388772 | 388942 |
| exon | 388973 | 389182 |
| exon | 389319 | 389591 |
| exon | 389926 | 390500 |
| CDS | 388217 | 388276 |
| CDS | 388772 | 388942 |
| CDS | 388973 | 389182 |
| CDS | 389319 | 389591 |
| CDS | 389926 | 390288 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF03492.14 | Methyltransf_7 | 34 | 356 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0008168 | methyltransferase activity |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.