Gene details

Annotation of co-expression genes

PH01001270G0050's details annotation

1.Annotation

ICBR annotation: oxidoreductase, putative, expressed

Blast result AT2G43080 : 5.00E-104
Blast annotation: P4H isoform 1

2.Location

Scaffold: PH01001270
Strand: +

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	null	null

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

Pfam Accession	Pfam Annotation	Alignment Start	Alignment Start
PF13640.5	2OG-FeII_Oxy_3	167	279

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
Arginine and proline metabolism	prolyl 4-hydroxylase [EC:1.14.11.2]	ko00330	K00472

10.Gene Ontology

GO Accession	GO Annotation
GO:0005506	iron ion binding
GO:0016491	oxidoreductase activity
GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0016706	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0031418	L-ascorbic acid binding
GO:0055114	oxidation-reduction process

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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