PH01001283G0360's details annotation
1.Annotation
ICBR annotation: O-methyltransferase, putative, expressed
Blast result AT5G54160 : 4.00E-131
Blast annotation: O-methyltransferase 1
2.Location
Scaffold: PH01001283
Strand: -
| Region | Start | End |
| gene | 235266 | 238667 |
| mRNA | 235266 | 238667 |
| exon | 235266 | 236197 |
| exon | 238326 | 238667 |
| CDS | 235640 | 236197 |
| CDS | 238326 | 238574 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM001096 | RLK-Pelle_LRR-VI-2 (from iTAK) Flavone_and_flavonol_biosynthesis Mismatch_repair Nucleotide_excision_repair Homologous_recombination DNA_replication regulation_of_cyclin-dependent_protein_serine/threonine_kinase_activity DNA_replication |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF08100.10 | Dimerisation | 31 | 82 |
| PF00891.17 | Methyltransf_2 | 126 | 345 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| Flavone and flavonol biosynthesis | flavonol 3-O-methyltransferase [EC:2.1.1.76] | ko00944 | K05279 |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0008168 | methyltransferase activity |
| GO:0008171 | O-methyltransferase activity |
| GO:0046983 | protein dimerization activity |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.