PH01001308G0500's details annotation
1.Annotation
ICBR annotation: ybaK/prolyl-tRNA synthetase family protein, putative, expressed
Blast result AT1G44835 : 6.50E-06
Blast annotation: YbaK/aminoacyl-tRNA synthetase-associated domain
2.Location
Scaffold: PH01001308
Strand: +
| Region | Start | End |
| gene | 322045 | 328805 |
| mRNA | 322045 | 328805 |
| exon | 322045 | 323618 |
| exon | 325537 | 325800 |
| exon | 325983 | 326036 |
| exon | 326751 | 326809 |
| exon | 326897 | 326949 |
| exon | 327701 | 328805 |
| CDS | 323273 | 323618 |
| CDS | 325537 | 325800 |
| CDS | 325983 | 326036 |
| CDS | 326751 | 326809 |
| CDS | 326897 | 326949 |
| CDS | 327701 | 327926 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.