PH01001326G0410's details annotation
1.Annotation
ICBR annotation: methyltransferase domain containing protein, expressed
Blast result AT2G31740 : 2.60E-77
Blast annotation: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
2.Location
Scaffold: PH01001326
Strand: -
| Region | Start | End |
| gene | 260039 | 266156 |
| mRNA | 260039 | 266156 |
| exon | 260039 | 261436 |
| exon | 261533 | 261683 |
| exon | 261796 | 261935 |
| exon | 262495 | 262569 |
| exon | 262636 | 262716 |
| exon | 262882 | 263003 |
| exon | 263522 | 263814 |
| exon | 264979 | 266156 |
| CDS | 261254 | 261436 |
| CDS | 261533 | 261683 |
| CDS | 261796 | 261935 |
| CDS | 262495 | 262569 |
| CDS | 262636 | 262716 |
| CDS | 262882 | 263003 |
| CDS | 263522 | 263814 |
| CDS | 264979 | 265427 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.