PH01001326G0480's details annotation
1.Annotation
ICBR annotation: exostosin family domain containing protein, expressed
Blast result AT5G61840 : 1.80E-43
Blast annotation: Exostosin family protein
2.Location
Scaffold: PH01001326
Strand: +
| Region | Start | End |
| gene | 309272 | 312091 |
| mRNA | 309272 | 312091 |
| exon | 309272 | 309860 |
| exon | 311056 | 311117 |
| exon | 311233 | 311293 |
| exon | 311642 | 312091 |
| CDS | 309530 | 309860 |
| CDS | 311056 | 311117 |
| CDS | 311233 | 311293 |
| CDS | 311642 | 311913 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF03016.14 | Exostosin | 165 | 232 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0016020 | membrane |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.