PH01001331G0260's details annotation
1.Annotation
ICBR annotation: growth regulator related protein, putative, expressed
Blast result AT3G03810 : 0.00E+00
Blast annotation: O-fucosyltransferase family protein
2.Location
Scaffold: PH01001331
Strand: -
| Region | Start | End |
| gene | 153814 | 160440 |
| mRNA | 153814 | 160440 |
| exon | 153814 | 154845 |
| exon | 155202 | 155755 |
| exon | 156519 | 156647 |
| exon | 156754 | 156844 |
| exon | 157239 | 157351 |
| exon | 157440 | 157683 |
| exon | 157801 | 157889 |
| exon | 157965 | 158032 |
| exon | 158571 | 158655 |
| exon | 158834 | 160440 |
| CDS | 154407 | 154845 |
| CDS | 155202 | 155755 |
| CDS | 156519 | 156647 |
| CDS | 156754 | 156844 |
| CDS | 157239 | 157351 |
| CDS | 157440 | 157683 |
| CDS | 157801 | 157889 |
| CDS | 157965 | 158032 |
| CDS | 158571 | 158655 |
| CDS | 158834 | 158986 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF10250.8 | O-FucT | 89 | 385 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.