PH01001359G0150's details annotation
1.Annotation
ICBR annotation: STE_MEKK_ste11_MAP3K.1 - STE kinases include homologs to sterile 7, sterile 11 and sterile 20 from yeast, expressed
Blast result AT3G13530 : 0.00E+00
Blast annotation: mitogen-activated protein kinase kinase kinase 7
2.Location
Scaffold: PH01001359
Strand: +
| Region | Start | End |
| gene | 99733 | 110245 |
| mRNA | 99733 | 110245 |
| exon | 99733 | 100126 |
| exon | 101296 | 101592 |
| exon | 101708 | 101752 |
| exon | 102373 | 102552 |
| exon | 102632 | 102715 |
| exon | 102804 | 103124 |
| exon | 103640 | 103723 |
| exon | 103881 | 104535 |
| exon | 107769 | 108163 |
| exon | 108271 | 108405 |
| exon | 108902 | 109308 |
| exon | 109401 | 109515 |
| exon | 109683 | 110245 |
| CDS | 99836 | 100126 |
| CDS | 101296 | 101592 |
| CDS | 101708 | 101752 |
| CDS | 102373 | 102552 |
| CDS | 102632 | 102715 |
| CDS | 102804 | 103124 |
| CDS | 103640 | 103723 |
| CDS | 103881 | 104535 |
| CDS | 107769 | 108163 |
| CDS | 108271 | 108405 |
| CDS | 108902 | 109308 |
| CDS | 109401 | 109515 |
| CDS | 109683 | 109859 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM001315 | STE_STE-Pl (from iTAK) |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005488 | binding |
| GO:0005515 | protein binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.