PH01001401G0280's details annotation
1.Annotation
ICBR annotation: diphthine synthase, putative, expressed
Blast result AT4G31790 : 1.00E-121
Blast annotation: Tetrapyrrole (Corrin/Porphyrin) Methylases
2.Location
Scaffold: PH01001401
Strand: -
| Region | Start | End |
| gene | 191116 | 195266 |
| mRNA | 191116 | 195266 |
| exon | 191116 | 191345 |
| exon | 191535 | 191626 |
| exon | 191812 | 191851 |
| exon | 192372 | 192601 |
| exon | 193957 | 194081 |
| exon | 194176 | 195266 |
| CDS | 191161 | 191345 |
| CDS | 191535 | 191626 |
| CDS | 191812 | 191851 |
| CDS | 192372 | 192601 |
| CDS | 193957 | 194081 |
| CDS | 194176 | 194325 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00590.19 | TP_methylase | 1 | 241 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0004164 | diphthine synthase activity |
| GO:0008152 | metabolic process |
| GO:0008168 | methyltransferase activity |
| GO:0017183 | peptidyl-diphthamide biosynthetic process from peptidyl-histidine |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.