PH01001411G0310's details annotation
1.Annotation
ICBR annotation: cytochrome b5-like Heme/Steroid binding domain containing protein, expressed
Blast result AT5G53560 : 1.10E-51
Blast annotation: cytochrome B5 isoform E
2.Location
Scaffold: PH01001411
Strand: +
| Region | Start | End |
| gene | 222732 | 225323 |
| mRNA | 222732 | 225323 |
| exon | 222732 | 223192 |
| exon | 224734 | 224800 |
| exon | 224910 | 225323 |
| CDS | 223106 | 223192 |
| CDS | 224734 | 224800 |
| CDS | 224910 | 225160 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00173.27 | Cyt-b5 | 11 | 80 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0020037 | heme binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.