PH01001487G0350's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT1G15780 : 2.00E-120
Blast annotation: -
2.Location
Scaffold: PH01001487
Strand: -
| Region | Start | End |
| gene | 280285 | 289848 |
| mRNA | 280285 | 289848 |
| exon | 280285 | 281091 |
| exon | 281190 | 281278 |
| exon | 281377 | 281571 |
| exon | 281753 | 282094 |
| exon | 282670 | 284034 |
| exon | 284744 | 284814 |
| exon | 285769 | 287013 |
| exon | 287734 | 287871 |
| exon | 287927 | 288012 |
| exon | 288905 | 289848 |
| CDS | 280890 | 281091 |
| CDS | 281190 | 281278 |
| CDS | 281377 | 281571 |
| CDS | 281753 | 282094 |
| CDS | 282670 | 284034 |
| CDS | 284744 | 284814 |
| CDS | 285769 | 287013 |
| CDS | 287734 | 287871 |
| CDS | 287927 | 288012 |
| CDS | 288905 | 289080 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.