PH01001489G0110's details annotation
1.Annotation
ICBR annotation: OsDegp8 - Putative Deg protease homologue, expressed
Blast result AT1G28320 : 8.00E-17
Blast annotation: protease-related
2.Location
Scaffold: PH01001489
Strand: +
| Region | Start | End |
| gene | 74455 | 78180 |
| mRNA | 74455 | 78180 |
| exon | 74455 | 74785 |
| exon | 76427 | 76607 |
| exon | 76705 | 76755 |
| exon | 77092 | 77166 |
| exon | 77481 | 77623 |
| exon | 77667 | 77808 |
| exon | 78023 | 78180 |
| CDS | 74622 | 74785 |
| CDS | 76427 | 76607 |
| CDS | 76705 | 76755 |
| CDS | 77092 | 77166 |
| CDS | 77481 | 77623 |
| CDS | 77667 | 77808 |
| CDS | 78023 | 78142 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.