PH01001494G0320's details annotation
1.Annotation
ICBR annotation: AGC_PVPK_like_kin82y.13 - ACG kinases include homologs to PKA, PKG and PKC, expressed
Blast result AT5G47750 : 0
Blast annotation: D6 protein kinase like 2
2.Location
Scaffold: PH01001494
Strand: -
| Region | Start | End |
| gene | 250794 | 255515 |
| mRNA | 250794 | 255515 |
| exon | 250794 | 252320 |
| exon | 252820 | 255515 |
| CDS | 251444 | 252320 |
| CDS | 252820 | 253706 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000521 | protein complex, microtubule, cytokinesis microtubule cytoskeleton organization, protein polymerization, microtubule-based process, AGC_RSK-2 (from iTAK) |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00069.24 | Pkinase | 194 | 343 |
| PF00069.24 | Pkinase | 428 | 531 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0004672 | protein kinase activity |
| GO:0004674 | protein serine/threonine kinase activity |
| GO:0005524 | ATP binding |
| GO:0006468 | protein phosphorylation |
| GO:0016772 | transferase activity, transferring phosphorus-containing groups |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.