PH01001505G0130's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result - : -
Blast annotation: -
2.Location
Scaffold: PH01001505
Strand: +
| Region | Start | End |
| gene | 100109 | 106683 |
| mRNA | 100109 | 106683 |
| exon | 100109 | 102167 |
| exon | 102268 | 103101 |
| exon | 103147 | 104942 |
| exon | 105055 | 106683 |
| CDS | 101964 | 102167 |
| CDS | 102268 | 103101 |
| CDS | 103147 | 104942 |
| CDS | 105055 | 106363 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM001108 | RLK-Pelle_LRR-XV (from iTAK) GT77 GlycosylTransferases C3H Transcription_Regulator(from PlantTFDB) Phosphatidylinositol_signaling_system Inositol_phosphate_metabolism |
| coexpression network | CFinderM001271 | RLK-Pelle_LysM (from iTAK) |
| coexpression network | CFinderM001835 | MYB_related Transcription_Regulator(from PlantTFDB) MYB-related Transcription_Regulator(from iTAK) nuclear chromosome, chromatin binding, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.