Gene details

Annotation of co-expression genes

PH01001523G0390's details annotation

1.Annotation

ICBR annotation: expressed_protein

Blast result AT5G50110 : 1.40E-66
Blast annotation: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein

2.Location

Scaffold: PH01001523
Strand: -

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM000972	solute:hydrogen antiporter activity, GT31 GlycosylTransferases cation transport, rRNA methyltransferase activity, magnesium_ion_transport rRNA processing, transmembrane transport, magnesium_ion_transmembrane_transporter_activity galactosyltransferase activity, protein glycosylation,
coexpression network	CFinderM001084	mitochondrial proton-transporting ATP synthase complex, coupling factor F(o), rRNA methyltransferase activity, rRNA processing, ATP synthesis coupled proton transport, hydrogen ion transmembrane transporter activity, serine-type peptidase activity,

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
null	null

8.Protein domain

Pfam Accession	Pfam Annotation	Alignment Start	Alignment Start
PF02527.14	GidB	60	248

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
null	null	null	null

10.Gene Ontology

GO Accession	GO Annotation
GO:0005737	cytoplasm
GO:0006364	rRNA processing
GO:0008649	rRNA methyltransferase activity

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

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