PH01001542G0390's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT2G30820 : 5.30E-24
Blast annotation: -
2.Location
Scaffold: PH01001542
Strand: +
| Region | Start | End |
| gene | 222482 | 226629 |
| mRNA | 222482 | 226629 |
| exon | 222482 | 223214 |
| exon | 223320 | 223374 |
| exon | 223494 | 223570 |
| exon | 224902 | 224955 |
| exon | 225061 | 225131 |
| exon | 225214 | 226036 |
| exon | 226119 | 226201 |
| exon | 226348 | 226629 |
| CDS | 223155 | 223214 |
| CDS | 223320 | 223374 |
| CDS | 223494 | 223570 |
| CDS | 224902 | 224955 |
| CDS | 225061 | 225131 |
| CDS | 225214 | 226036 |
| CDS | 226119 | 226201 |
| CDS | 226348 | 226393 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.