PH01001543G0150's details annotation
1.Annotation
ICBR annotation: ferric-chelate reductase, putative, expressed
Blast result AT5G49740 : 0.00E+00
Blast annotation: ferric reduction oxidase 7
2.Location
Scaffold: PH01001543
Strand: +
| Region | Start | End |
| gene | 92367 | 99534 |
| mRNA | 92367 | 99534 |
| exon | 92367 | 94052 |
| exon | 94330 | 94420 |
| exon | 94831 | 95091 |
| exon | 95743 | 95893 |
| exon | 96166 | 96493 |
| exon | 96592 | 96862 |
| exon | 97049 | 97304 |
| exon | 97459 | 97897 |
| exon | 98691 | 98813 |
| exon | 98854 | 99038 |
| exon | 99074 | 99534 |
| CDS | 93824 | 94052 |
| CDS | 94330 | 94420 |
| CDS | 94831 | 95091 |
| CDS | 95743 | 95893 |
| CDS | 96166 | 96493 |
| CDS | 96592 | 96862 |
| CDS | 97049 | 97304 |
| CDS | 97459 | 97897 |
| CDS | 98691 | 98813 |
| CDS | 98854 | 99038 |
| CDS | 99074 | 99160 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF01794.18 | Ferric_reduct | 191 | 299 |
| PF08022.11 | FAD_binding_8 | 333 | 438 |
| PF08030.11 | NAD_binding_6 | 445 | 526 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.