Annotation of co-expression genes

PH01001546G0080's details annotation

1.Annotation

ICBR annotation: cytochrome P450 51, putative, expressed

Blast result AT1G11680 : 0.00E+00
Blast annotation: CYTOCHROME P450 51G1

2.Location

Scaffold: PH01001546
Strand: -

RegionStartEnd
gene6479869908
mRNA6479869908
exon6479866089
exon6885669908
CDS6508866089
CDS6885669143

UCSC genome browser

3.Network

Co-expression Network CategoryGlobal NetworkConditional Network
Co-expression Positive Top300 PCC genelist

MR network genelist 		Top300 PCC genelist

MR network genelist
Co-expression Negative Top300 PCC genelist

MR network genelist 		Top300 PCC genelist

MR network genelist
Predict protein-portein interaction null
miRNA-targets relationshipnull
 

4.Functional module

MethodModule IDFunction Annotation
coexpression networknullnull

5.Cis-elements

Details in 3kb promoter region

6.Expression profilings


7.Gene family

CategoryFamily
nullnull

8.Protein domain

Pfam AccessionPfam AnnotationAlignment StartAlignment Start
PF00067.21p4507402

9.KEGG Pathway

PathwayKEGG OrthologPathway IDKO
Steroid biosynthesiscytochrome P450, family 51 (sterol 14-demethylase) [EC:1.14.13.7]ko00100K05917

10.Gene Ontology

GO AccessionGO Annotation
GO:0004497monooxygenase activity
GO:0005506iron ion binding
GO:0009055electron carrier activity
GO:0016705oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037heme binding
GO:0055114oxidation-reduction process

Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
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