PH01001566G0150's details annotation
1.Annotation
ICBR annotation: OsFBX148 - F-box domain containing protein, expressed
Blast result AT3G61060 : 5.20E-87
Blast annotation: phloem protein 2-A13
2.Location
Scaffold: PH01001566
Strand: +
| Region | Start | End |
| gene | 101047 | 106000 |
| mRNA | 101047 | 106000 |
| exon | 101047 | 101815 |
| exon | 102119 | 102196 |
| exon | 102461 | 102579 |
| exon | 105295 | 106000 |
| CDS | 101489 | 101815 |
| CDS | 102119 | 102196 |
| CDS | 102461 | 102579 |
| CDS | 105295 | 105721 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF14299.5 | PP2 | 147 | 304 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005515 | protein binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.