PH01001568G0240's details annotation
1.Annotation
ICBR annotation: transmembrane 9 superfamily member, putative, expressed
Blast result AT3G13772 : 0.00E+00
Blast annotation: transmembrane nine 7
2.Location
Scaffold: PH01001568
Strand: +
| Region | Start | End |
| gene | 233932 | 238990 |
| mRNA | 233932 | 238990 |
| exon | 233932 | 234163 |
| exon | 235805 | 235969 |
| exon | 236092 | 236201 |
| exon | 236327 | 236420 |
| exon | 236515 | 236627 |
| exon | 237033 | 237180 |
| exon | 237252 | 238990 |
| CDS | 234026 | 234163 |
| CDS | 235805 | 235969 |
| CDS | 236092 | 236201 |
| CDS | 236327 | 236420 |
| CDS | 236515 | 236627 |
| CDS | 237033 | 237180 |
| CDS | 237252 | 238409 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF02990.15 | EMP70 | 65 | 596 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0016021 | integral to membrane |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.