PH01001569G0010's details annotation
1.Annotation
ICBR annotation: co-chaperone GrpE protein, putative, expressed
Blast result AT5G17710 : 1.40E-71
Blast annotation: Co-chaperone GrpE family protein
2.Location
Scaffold: PH01001569
Strand: +
| Region | Start | End |
| gene | 968 | 2555 |
| mRNA | 968 | 2555 |
| exon | 968 | 1480 |
| exon | 1519 | 1569 |
| exon | 1983 | 2555 |
| CDS | 968 | 1480 |
| CDS | 1519 | 1569 |
| CDS | 1983 | 2225 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF01025.18 | GrpE | 57 | 172 |
| PF01025.18 | GrpE | 175 | 229 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0000774 | adenyl-nucleotide exchange factor activity |
| GO:0006457 | protein folding |
| GO:0042803 | protein homodimerization activity |
| GO:0051087 | chaperone binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.