PH01001571G0290's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT5G11870 : 2.00E-58
Blast annotation: Alkaline phytoceramidase (aPHC)
2.Location
Scaffold: PH01001571
Strand: -
| Region | Start | End |
| gene | 215702 | 218797 |
| mRNA | 215702 | 218797 |
| exon | 215702 | 215969 |
| exon | 216276 | 216382 |
| exon | 216459 | 216580 |
| exon | 216677 | 216798 |
| exon | 217212 | 217332 |
| exon | 218218 | 218797 |
| CDS | 215865 | 215969 |
| CDS | 216276 | 216382 |
| CDS | 216459 | 216580 |
| CDS | 216677 | 216798 |
| CDS | 217212 | 217332 |
| CDS | 218218 | 218336 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.