PH01001603G0500's details annotation
1.Annotation
ICBR annotation: oxidoreductase, aldo/keto reductase family protein, putative, expressed
Blast result AT1G59950 : 1.10E-88
Blast annotation: NAD(P)-linked oxidoreductase superfamily protein
2.Location
Scaffold: PH01001603
Strand: -
| Region | Start | End |
| gene | 325830 | 328159 |
| mRNA | 325830 | 328159 |
| exon | 325830 | 326375 |
| exon | 326932 | 326955 |
| exon | 327101 | 327280 |
| exon | 327362 | 327605 |
| exon | 327716 | 328159 |
| CDS | 326145 | 326375 |
| CDS | 326932 | 326955 |
| CDS | 327101 | 327280 |
| CDS | 327362 | 327605 |
| CDS | 327716 | 328053 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00248.20 | Aldo_ket_red | 29 | 307 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0016491 | oxidoreductase activity |
| GO:0055114 | oxidation-reduction process |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.