PH01001692G0270's details annotation
1.Annotation
ICBR annotation: thioesterase family protein, putative, expressed
Blast result AT1G68280 : 1.40E-43
Blast annotation: Thioesterase superfamily protein
2.Location
Scaffold: PH01001692
Strand: +
| Region | Start | End |
| gene | 250894 | 253248 |
| mRNA | 250894 | 253248 |
| exon | 250894 | 251462 |
| exon | 251935 | 252035 |
| exon | 252231 | 252340 |
| exon | 252500 | 252595 |
| exon | 252854 | 253248 |
| CDS | 251263 | 251462 |
| CDS | 251935 | 252035 |
| CDS | 252231 | 252340 |
| CDS | 252500 | 252595 |
| CDS | 252854 | 252973 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM001589 | PHD Transcription_Regulator(from iTAK) fructose-bisphosphate aldolase activity, glycolysis, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF03061.21 | 4HBT | 100 | 183 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.