PH01001756G0400's details annotation
1.Annotation
ICBR annotation: amidase family protein, putative, expressed
Blast result AT5G64440 : 1.00E-148
Blast annotation: fatty acid amide hydrolase
2.Location
Scaffold: PH01001756
Strand: +
| Region | Start | End |
| gene | 270092 | 275042 |
| mRNA | 270092 | 275042 |
| exon | 270092 | 270425 |
| exon | 270740 | 270800 |
| exon | 271041 | 271234 |
| exon | 271322 | 271451 |
| exon | 271621 | 271698 |
| exon | 271772 | 271919 |
| exon | 272462 | 272574 |
| exon | 272656 | 272731 |
| exon | 273027 | 273098 |
| exon | 273261 | 273312 |
| exon | 273671 | 273751 |
| exon | 273822 | 273905 |
| exon | 274361 | 275042 |
| CDS | 270255 | 270425 |
| CDS | 270740 | 270800 |
| CDS | 271041 | 271234 |
| CDS | 271322 | 271451 |
| CDS | 271621 | 271698 |
| CDS | 271772 | 271919 |
| CDS | 272462 | 272574 |
| CDS | 272656 | 272731 |
| CDS | 273027 | 273098 |
| CDS | 273261 | 273312 |
| CDS | 273671 | 273751 |
| CDS | 273822 | 273905 |
| CDS | 274361 | 274549 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF01425.20 | Amidase | 165 | 456 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0016884 | carbon-nitrogen ligase activity, with glutamine as amido-N-donor |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.