PH01001756G0410's details annotation
1.Annotation
ICBR annotation: serine-type peptidase, putative, expressed
Blast result AT2G31140 : 1.80E-66
Blast annotation: Peptidase S24/S26A/S26B/S26C family protein
2.Location
Scaffold: PH01001756
Strand: +
| Region | Start | End |
| gene | 288582 | 289674 |
| mRNA | 288582 | 289674 |
| exon | 288582 | 289064 |
| exon | 289279 | 289385 |
| exon | 289485 | 289674 |
| CDS | 288975 | 289064 |
| CDS | 289279 | 289385 |
| CDS | 289485 | 289566 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0006508 | proteolysis |
| GO:0008236 | serine-type peptidase activity |
| GO:0016020 | membrane |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.