PH01001759G0250's details annotation
1.Annotation
ICBR annotation: digalactosyldiacylglycerol synthase, chloroplast precursor, putative, expressed
Blast result AT3G11670 : 2.30E-95
Blast annotation: UDP-Glycosyltransferase superfamily protein
2.Location
Scaffold: PH01001759
Strand: +
| Region | Start | End |
| gene | 189370 | 194514 |
| mRNA | 189370 | 194514 |
| exon | 189370 | 190164 |
| exon | 190800 | 191422 |
| exon | 193541 | 193731 |
| exon | 193841 | 194514 |
| CDS | 190086 | 190164 |
| CDS | 190800 | 191422 |
| CDS | 193541 | 193731 |
| CDS | 193841 | 194384 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF01535.19 | PPR | 100 | 121 |
| PF01535.19 | PPR | 164 | 183 |
| PF01535.19 | PPR | 194 | 219 |
| PF00534.19 | Glycos_transf_1 | 229 | 332 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0009058 | biosynthetic process |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.