PH01001759G0410's details annotation
1.Annotation
ICBR annotation: digalactosyldiacylglycerol synthase, chloroplast precursor, putative, expressed
Blast result AT3G11670 : 9.30E-61
Blast annotation: UDP-Glycosyltransferase superfamily protein
2.Location
Scaffold: PH01001759
Strand: +
| Region | Start | End |
| gene | 255655 | 261230 |
| mRNA | 255655 | 261230 |
| exon | 255655 | 257295 |
| exon | 257794 | 257892 |
| exon | 259043 | 259146 |
| exon | 259249 | 259441 |
| exon | 260642 | 261230 |
| CDS | 256952 | 257295 |
| CDS | 257794 | 257892 |
| CDS | 259043 | 259146 |
| CDS | 259249 | 259441 |
| CDS | 260642 | 261167 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000794 | MYB_related Transcription_Regulator(from PlantTFDB) MYB-related Transcription_Regulator(from iTAK) RLK-Pelle_CR4L (from iTAK) |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.