PH01001797G0450's details annotation
1.Annotation
ICBR annotation: inositol-1-monophosphatase, putative, expressed
Blast result AT4G39120 : 7.10E-23
Blast annotation: myo-inositol monophosphatase like 2
2.Location
Scaffold: PH01001797
Strand: +
| Region | Start | End |
| gene | 241644 | 245852 |
| mRNA | 241644 | 245852 |
| exon | 241644 | 242628 |
| exon | 242724 | 242818 |
| exon | 242899 | 242948 |
| exon | 243558 | 243708 |
| exon | 243997 | 244204 |
| exon | 244859 | 244925 |
| exon | 245035 | 245124 |
| exon | 245720 | 245852 |
| CDS | 242588 | 242628 |
| CDS | 242724 | 242818 |
| CDS | 242899 | 242948 |
| CDS | 243558 | 243708 |
| CDS | 243997 | 244204 |
| CDS | 244859 | 244925 |
| CDS | 245035 | 245124 |
| CDS | 245720 | 245824 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM000196 | SCY1_SCYL2 (from iTAK) phosphatidylinositol phosphorylation, ubiquitin ligase complex, protein ubiquitination, binding, |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00459.24 | Inositol_P | 2 | 62 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0046854 | phosphatidylinositol phosphorylation |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.