Annotation of co-expression genes

PH01001806G0270's details annotation

1.Annotation

ICBR annotation: hydrolase, alpha/beta fold family domain containing protein, expressed

Blast result - : -
Blast annotation: -

2.Location

Scaffold: PH01001806
Strand: -

RegionStartEnd
gene158052159411
mRNA158052159411
exon158052158426
exon159036159153
exon159248159411
CDS158180158426
CDS159036159153
CDS159248159320

UCSC genome browser

3.Network

Co-expression Network CategoryGlobal NetworkConditional Network
Co-expression Positive Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Co-expression Negative Top300 PCC genelist

MR network genelist
Top300 PCC genelist

MR network genelist
Predict protein-portein interaction null
miRNA-targets relationshipnull
 

4.Functional module

MethodModule IDFunction Annotation
coexpression networknullnull

5.Cis-elements

Details in 3kb promoter region

6.Expression profilings


7.Gene family

CategoryFamily
nullnull

8.Protein domain

Pfam AccessionPfam AnnotationAlignment StartAlignment Start
nullnullnullnull

9.KEGG Pathway

PathwayKEGG OrthologPathway IDKO
nullnullnullnull

10.Gene Ontology

GO AccessionGO Annotation
GO:0003824catalytic activity

Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
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