PH01001845G0470's details annotation
1.Annotation
ICBR annotation: OsFBK20 - F-box domain and kelch repeat containing protein, expressed
Blast result AT5G42350 : 7.00E-75
Blast annotation: Galactose oxidase/kelch repeat superfamily protein
2.Location
Scaffold: PH01001845
Strand: +
| Region | Start | End |
| gene | 269148 | 272490 |
| mRNA | 269148 | 272490 |
| exon | 269148 | 270514 |
| exon | 270701 | 272490 |
| CDS | 270227 | 270514 |
| CDS | 270701 | 271726 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00646.32 | F-box | 54 | 89 |
| PF01344.24 | Kelch_1 | 96 | 136 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005515 | protein binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.