PH01001902G0110's details annotation
1.Annotation
ICBR annotation: monodehydroascorbate reductase, putative, expressed
Blast result AT3G52880 : 0.00E+00
Blast annotation: monodehydroascorbate reductase 1
2.Location
Scaffold: PH01001902
Strand: -
| Region | Start | End |
| gene | 72414 | 75702 |
| mRNA | 72414 | 75702 |
| exon | 72414 | 72875 |
| exon | 72965 | 73105 |
| exon | 73248 | 73373 |
| exon | 73460 | 73677 |
| exon | 73733 | 73952 |
| exon | 74106 | 74224 |
| exon | 74792 | 74872 |
| exon | 74957 | 75008 |
| exon | 75340 | 75411 |
| exon | 75586 | 75702 |
| CDS | 72552 | 72875 |
| CDS | 72965 | 73105 |
| CDS | 73248 | 73373 |
| CDS | 73460 | 73677 |
| CDS | 73733 | 73952 |
| CDS | 74106 | 74224 |
| CDS | 74792 | 74872 |
| CDS | 74957 | 75008 |
| CDS | 75340 | 75411 |
| CDS | 75586 | 75639 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF07992.13 | Pyr_redox_2 | 8 | 323 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| Ascorbate and aldarate metabolism | monodehydroascorbate reductase (NADH) [EC:1.6.5.4] | ko00053 | K08232 |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0016491 | oxidoreductase activity |
| GO:0050660 | flavin adenine dinucleotide binding |
| GO:0055114 | oxidation-reduction process |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.