Gene details

Annotation of co-expression genes

PH01001907G0400's details annotation

1.Annotation

ICBR annotation: beta-galactosidase precursor, putative, expressed

Blast result AT3G52840 : 0.00E+00
Blast annotation: beta-galactosidase 2

2.Location

Scaffold: PH01001907
Strand: +

3.Network

Co-expression Network Category	Global Network	Conditional Network
Co-expression Positive	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Co-expression Negative	Top300 PCC genelist MR network genelist	Top300 PCC genelist MR network genelist
Predict protein-portein interaction	null
miRNA-targets relationship	null

4.Functional module

Method	Module ID	Function Annotation
coexpression network	CFinderM000512	GH35 Glycoside_Hydrolases MYB_related Transcription_Regulator(from PlantTFDB) MYB-related Transcription_Regulator(from iTAK)
coexpression network	CFinderM000882	GH35 Glycoside_Hydrolases transferase activity, transferring pentosyl groups,
coexpression network	CFinderM001601	GH35 Glycoside_Hydrolases

5.Cis-elements

6.Expression profilings

7.Gene family

Category	Family
Glycoside_Hydrolases	GH35

8.Protein domain

Pfam Accession	Pfam Annotation	Alignment Start	Alignment Start
PF01301.18	Glyco_hydro_35	36	372

9.KEGG Pathway

Pathway	KEGG Ortholog	Pathway ID	KO
null	null	null	null

10.Gene Ontology

GO Accession	GO Annotation
GO:0003824	catalytic activity
GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0005975	carbohydrate metabolic process

      Maintained by Xuelian Ma  - Zhen Su's Lab -  China Agricultural University

    © 2017 All Rights Reserved.