PH01001915G0080's details annotation
1.Annotation
ICBR annotation: major facilitator superfamily antiporter, putative, expressed
Blast result AT3G43790 : 7.00E-111
Blast annotation: zinc induced facilitator-like 2
2.Location
Scaffold: PH01001915
Strand: -
| Region | Start | End |
| gene | 33501 | 39319 |
| mRNA | 33501 | 39319 |
| exon | 33501 | 33855 |
| exon | 34070 | 34113 |
| exon | 34557 | 34645 |
| exon | 35041 | 35156 |
| exon | 35476 | 35563 |
| exon | 36005 | 36175 |
| exon | 36476 | 36551 |
| exon | 36637 | 36686 |
| exon | 36785 | 36847 |
| exon | 37144 | 37246 |
| exon | 37365 | 37467 |
| exon | 37575 | 37635 |
| exon | 37956 | 37996 |
| exon | 38291 | 39319 |
| CDS | 33755 | 33855 |
| CDS | 34070 | 34113 |
| CDS | 34557 | 34645 |
| CDS | 35041 | 35156 |
| CDS | 35476 | 35563 |
| CDS | 36005 | 36175 |
| CDS | 36476 | 36551 |
| CDS | 36637 | 36686 |
| CDS | 36785 | 36847 |
| CDS | 37144 | 37246 |
| CDS | 37365 | 37467 |
| CDS | 37575 | 37635 |
| CDS | 37956 | 37996 |
| CDS | 38291 | 38441 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF07690.15 | MFS_1 | 45 | 152 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0016021 | integral to membrane |
| GO:0055085 | transmembrane transport |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.