PH01001947G0140's details annotation
1.Annotation
ICBR annotation: Brix domain containing protein, putative, expressed
Blast result AT3G23620 : 2.80E-41
Blast annotation: Ribosomal RNA processing Brix domain protein
2.Location
Scaffold: PH01001947
Strand: -
| Region | Start | End |
| gene | 90712 | 93772 |
| mRNA | 90712 | 93772 |
| exon | 90712 | 91347 |
| exon | 91434 | 91497 |
| exon | 91806 | 91909 |
| exon | 92019 | 92285 |
| exon | 93516 | 93772 |
| CDS | 91240 | 91347 |
| CDS | 91434 | 91497 |
| CDS | 91806 | 91909 |
| CDS | 92019 | 92285 |
| CDS | 93516 | 93584 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| null | null | null | null |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.