PH01001971G0260's details annotation
1.Annotation
ICBR annotation: threonine synthase, chloroplast precursor, putative, expressed
Blast result AT4G29840 : 0.00E+00
Blast annotation: Pyridoxal-5-phosphate-dependent enzyme family protein
2.Location
Scaffold: PH01001971
Strand: -
| Region | Start | End |
| gene | 221641 | 223602 |
| mRNA | 221641 | 223602 |
| exon | 221641 | 223602 |
| CDS | 221800 | 223410 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF00291.24 | PALP | 171 | 481 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| 268 Glycine, serine and threonine metabolism | threonine synthase [EC:4.2.3.1] | K01733 | |
| Vitamin B6 metabolism | threonine synthase [EC:4.2.3.1] | ko00750 | K01733 |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.