PH01001986G0020's details annotation
1.Annotation
ICBR annotation: plastocyanin-like domain containing protein, putative, expressed
Blast result - : -
Blast annotation: -
2.Location
Scaffold: PH01001986
Strand: +
| Region | Start | End |
| gene | 9316 | 11060 |
| mRNA | 9316 | 11060 |
| exon | 9316 | 10301 |
| exon | 10586 | 11060 |
| CDS | 10130 | 10301 |
| CDS | 10586 | 10932 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | CFinderM001226 | protein complex, microtubule, translational initiation, microtubule-based process, protein polymerization, GTP_catabolic_process Phagosome RNA_transport |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF02298.16 | Cu_bind_like | 36 | 120 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0005507 | copper ion binding |
| GO:0009055 | electron carrier activity |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.