PH01001995G0100's details annotation
1.Annotation
ICBR annotation: zinc finger, C3HC4 type domain containing protein, expressed
Blast result AT5G38900 : 1.60E-76
Blast annotation: Thioredoxin superfamily protein
2.Location
Scaffold: PH01001995
Strand: -
| Region | Start | End |
| gene | 69825 | 72703 |
| mRNA | 69825 | 72703 |
| exon | 69825 | 69993 |
| exon | 70102 | 70158 |
| exon | 70246 | 70330 |
| exon | 72016 | 72059 |
| exon | 72150 | 72272 |
| exon | 72358 | 72703 |
| CDS | 69904 | 69993 |
| CDS | 70102 | 70158 |
| CDS | 70246 | 70330 |
| CDS | 72016 | 72059 |
| CDS | 72150 | 72272 |
| CDS | 72358 | 72489 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF01323.19 | DSBA | 11 | 208 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0015035 | protein disulfide oxidoreductase activity |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.