PH01002035G0390's details annotation
1.Annotation
ICBR annotation: OsWRKY37 - Superfamily of TFs having WRKY and zinc finger domains, expressed
Blast result AT1G30650 : 7.30E-60
Blast annotation: WRKY DNA-binding protein 14
2.Location
Scaffold: PH01002035
Strand: +
| Region | Start | End |
| gene | 221760 | 225600 |
| mRNA | 221760 | 225600 |
| exon | 221760 | 222752 |
| exon | 223308 | 223451 |
| exon | 224776 | 225600 |
| CDS | 222433 | 222752 |
| CDS | 223308 | 223451 |
| CDS | 224776 | 225484 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| Transcription_Regulator(from iTAK) | WRKY |
| Transcription_Regulator(from PlantTFDB) | WRKY |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF03106.14 | WRKY | 235 | 292 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| GO:0003700 | sequence-specific DNA binding transcription factor activity |
| GO:0006355 | regulation of transcription, DNA-dependent |
| GO:0043565 | sequence-specific DNA binding |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.