PH01002036G0140's details annotation
1.Annotation
ICBR annotation: GTP-binding protein, putative, expressed
Blast result AT1G30580 : 2.00E-55
Blast annotation: GTP binding
2.Location
Scaffold: PH01002036
Strand: +
| Region | Start | End |
| gene | 78963 | 83452 |
| mRNA | 78963 | 83452 |
| exon | 78963 | 79330 |
| exon | 80356 | 80420 |
| exon | 81147 | 81323 |
| exon | 81618 | 81693 |
| exon | 81849 | 81956 |
| exon | 82459 | 82509 |
| exon | 82608 | 83452 |
| CDS | 79202 | 79330 |
| CDS | 80356 | 80420 |
| CDS | 81147 | 81323 |
| CDS | 81618 | 81693 |
| CDS | 81849 | 81956 |
| CDS | 82459 | 82509 |
| CDS | 82608 | 82706 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | null | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF06071.12 | YchF-GTPase_C | 139 | 227 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.