PH01002041G0150's details annotation
1.Annotation
ICBR annotation: expressed_protein
Blast result AT5G19855 : 8.90E-55
Blast annotation: Chaperonin-like RbcX protein
2.Location
Scaffold: PH01002041
Strand: +
| Region | Start | End |
| gene | 101811 | 105153 |
| mRNA | 101811 | 105153 |
| exon | 101811 | 102410 |
| exon | 102546 | 102856 |
| exon | 103433 | 103524 |
| exon | 103624 | 103681 |
| exon | 103790 | 103855 |
| exon | 103960 | 105153 |
| CDS | 102320 | 102410 |
| CDS | 102546 | 102856 |
| CDS | 103433 | 103524 |
| CDS | 103624 | 103681 |
| CDS | 103790 | 103855 |
| CDS | 103960 | 104082 |
3.Network
| Co-expression Network Category | Global Network | Conditional Network | |
| Co-expression Positive |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Co-expression Negative |
Top300 PCC genelist MR network genelist |
Top300 PCC genelist MR network genelist |
|
| Predict protein-portein interaction | details | ||
| miRNA-targets relationship | null | ||
4.Functional module
| Method | Module ID | Function Annotation |
| coexpression network | null | null |
5.Cis-elements
Details in 3kb promoter region
6.Expression profilings
7.Gene family
| Category | Family |
| null | null |
8.Protein domain
| Pfam Accession | Pfam Annotation | Alignment Start | Alignment Start |
| PF02341.14 | RcbX | 135 | 232 |
9.KEGG Pathway
| Pathway | KEGG Ortholog | Pathway ID | KO |
| null | null | null | null |
10.Gene Ontology
| GO Accession | GO Annotation |
| null | null |
Maintained by Xuelian Ma - Zhen Su's Lab - China Agricultural University
© 2017 All Rights Reserved.
© 2017 All Rights Reserved.